Cluster: HRGMv2_3739_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3739
- CGC Family ID: CGCFAM_05947
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3739_9 | HRGMv2_3739_9_1 | 357 | 2435 | + | GT51 |
| pfam | HRGMv2_3739_9 | HRGMv2_3739_9_2 | 3561 | 4583 | - | IU_nuc_hydro |
| TC | HRGMv2_3739_9 | HRGMv2_3739_9_3 | 4596 | 5963 | - | 2.A.61.1.2 |
Gene ID: HRGMv2_3739_9_1
Type: CAZyme
Location: 357 - 2435 (+)
Type: CAZyme
Location: 357 - 2435 (+)
Gene ID: HRGMv2_3739_9_2
Type: pfam
Location: 3561 - 4583 (-)
Type: pfam
Location: 3561 - 4583 (-)
Gene ID: HRGMv2_3739_9_3
Type: TC
Location: 4596 - 5963 (-)
Type: TC
Location: 4596 - 5963 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Dialisteraceae
Genus
Dialister
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3739_9_1 | vegan > omnivore | 1.45192 | 0.02973 |
| HRGMv2_3739_9_1 | vegetarian > omnivore | 2.84843 | 0.00397 |
| HRGMv2_3739_9_1 | vegetarian > vegan | 1.39650 | 0.02538 |