Cluster: HRGMv2_3739_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3739
- CGC Family ID: CGCFAM_04800
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3739_2 | HRGMv2_3739_2_2 | 1772 | 2683 | - | GT51 |
| STP | HRGMv2_3739_2 | HRGMv2_3739_2_3 | 3023 | 4972 | + | HATPase_c |
| TF | HRGMv2_3739_2 | HRGMv2_3739_2_4 | 5304 | 6227 | - | HTH_1 |
| TC | HRGMv2_3739_2 | HRGMv2_3739_2_5 | 7532 | 8938 | + | 2.A.47.1.13 |
| TC | HRGMv2_3739_2 | HRGMv2_3739_2_6 | 9871 | 11511 | + | 2.A.1.15.17 |
Gene ID: HRGMv2_3739_2_2
Type: CAZyme
Location: 1772 - 2683 (-)
Type: CAZyme
Location: 1772 - 2683 (-)
Gene ID: HRGMv2_3739_2_3
Type: STP
Location: 3023 - 4972 (+)
Type: STP
Location: 3023 - 4972 (+)
Gene ID: HRGMv2_3739_2_4
Type: TF
Location: 5304 - 6227 (-)
Type: TF
Location: 5304 - 6227 (-)
Gene ID: HRGMv2_3739_2_5
Type: TC
Location: 7532 - 8938 (+)
Type: TC
Location: 7532 - 8938 (+)
Gene ID: HRGMv2_3739_2_6
Type: TC
Location: 9871 - 11511 (+)
Type: TC
Location: 9871 - 11511 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Dialisteraceae
Genus
Dialister
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3739_2_5 | vegan > omnivore | 19.44733 | 0.02973 |
| HRGMv2_3739_2_5 | vegetarian > omnivore | 20.21620 | 0.00397 |