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Cluster: HRGMv2_3735_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3735_5 HRGMv2_3735_5_42 42119 43639 - 1.B.23.1.23
TC HRGMv2_3735_5 HRGMv2_3735_5_43 43940 44467 - 3.A.1.26.5
TC HRGMv2_3735_5 HRGMv2_3735_5_44 44536 45882 - 2.A.26.1.9
STP HRGMv2_3735_5 HRGMv2_3735_5_45 46301 47305 + Peripla_BP_2
TC HRGMv2_3735_5 HRGMv2_3735_5_46 47403 49355 + 1.B.14.1.4
pfam HRGMv2_3735_5 HRGMv2_3735_5_47 49584 51383 + Sulfatase
pfam HRGMv2_3735_5 HRGMv2_3735_5_48 51615 53417 + Sulfatase
CAZyme HRGMv2_3735_5 HRGMv2_3735_5_49 53715 54701 + GT8
CAZyme HRGMv2_3735_5 HRGMv2_3735_5_50 54726 55916 + GT2
CAZyme HRGMv2_3735_5 HRGMv2_3735_5_51 55924 57114 + GT2
CAZyme HRGMv2_3735_5 HRGMv2_3735_5_52 57119 58327 + GT4
CAZyme HRGMv2_3735_5 HRGMv2_3735_5_53 58327 59523 + GT4
Gene ID: HRGMv2_3735_5_42
Type: TC
Location: 42119 - 43639 (-)
Gene ID: HRGMv2_3735_5_43
Type: TC
Location: 43940 - 44467 (-)
Gene ID: HRGMv2_3735_5_44
Type: TC
Location: 44536 - 45882 (-)
Gene ID: HRGMv2_3735_5_45
Type: STP
Location: 46301 - 47305 (+)
Gene ID: HRGMv2_3735_5_46
Type: TC
Location: 47403 - 49355 (+)
Gene ID: HRGMv2_3735_5_47
Type: pfam
Location: 49584 - 51383 (+)
Gene ID: HRGMv2_3735_5_48
Type: pfam
Location: 51615 - 53417 (+)
Gene ID: HRGMv2_3735_5_49
Type: CAZyme
Location: 53715 - 54701 (+)
Gene ID: HRGMv2_3735_5_50
Type: CAZyme
Location: 54726 - 55916 (+)
Gene ID: HRGMv2_3735_5_51
Type: CAZyme
Location: 55924 - 57114 (+)
Gene ID: HRGMv2_3735_5_52
Type: CAZyme
Location: 57119 - 58327 (+)
Gene ID: HRGMv2_3735_5_53
Type: CAZyme
Location: 58327 - 59523 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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