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Cluster: HRGMv2_3735_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3735_2 HRGMv2_3735_2_144 141695 142759 + 3.A.1.24.1
TC HRGMv2_3735_2 HRGMv2_3735_2_145 142716 143369 + 3.A.1.24.5
TC HRGMv2_3735_2 HRGMv2_3735_2_146 143399 144226 + 3.A.1.24.5
TC HRGMv2_3735_2 HRGMv2_3735_2_147 144269 145105 + 3.A.1.24.5
pfam HRGMv2_3735_2 HRGMv2_3735_2_148 145388 146530 - Phage_integrase | Phage_int_SAM_3
pfam HRGMv2_3735_2 HRGMv2_3735_2_149 146805 147419 - RNase_H | Cauli_VI
TC HRGMv2_3735_2 HRGMv2_3735_2_150 147505 148722 + 2.A.1.21.8
CAZyme HRGMv2_3735_2 HRGMv2_3735_2_151 148673 149785 - GT9
STP HRGMv2_3735_2 HRGMv2_3735_2_152 149782 151266 - PfkB
CAZyme HRGMv2_3735_2 HRGMv2_3735_2_153 151263 152465 - GT4
Gene ID: HRGMv2_3735_2_144
Type: TC
Location: 141695 - 142759 (+)
Gene ID: HRGMv2_3735_2_145
Type: TC
Location: 142716 - 143369 (+)
Gene ID: HRGMv2_3735_2_146
Type: TC
Location: 143399 - 144226 (+)
Gene ID: HRGMv2_3735_2_147
Type: TC
Location: 144269 - 145105 (+)
Gene ID: HRGMv2_3735_2_148
Type: pfam
Location: 145388 - 146530 (-)
Gene ID: HRGMv2_3735_2_149
Type: pfam
Location: 146805 - 147419 (-)
Gene ID: HRGMv2_3735_2_150
Type: TC
Location: 147505 - 148722 (+)
Gene ID: HRGMv2_3735_2_151
Type: CAZyme
Location: 148673 - 149785 (-)
Gene ID: HRGMv2_3735_2_152
Type: STP
Location: 149782 - 151266 (-)
Gene ID: HRGMv2_3735_2_153
Type: CAZyme
Location: 151263 - 152465 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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