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Cluster: HRGMv2_3735_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3735_19 HRGMv2_3735_19_2 1327 2250 - GT2
CAZyme HRGMv2_3735_19 HRGMv2_3735_19_3 2264 3031 - GT32
CAZyme HRGMv2_3735_19 HRGMv2_3735_19_4 3425 3901 - GT2
TC HRGMv2_3735_19 HRGMv2_3735_19_5 3984 4715 - 8.A.3.2.1
TC HRGMv2_3735_19 HRGMv2_3735_19_6 4697 6163 - 8.A.3.3.2
pfam HRGMv2_3735_19 HRGMv2_3735_19_7 6193 6885 - Poly_export | SLBB | SLBB_2
pfam HRGMv2_3735_19 HRGMv2_3735_19_8 6921 7709 - CpsB_CapC
TC HRGMv2_3735_19 HRGMv2_3735_19_9 7771 9201 - 9.B.18.1.3
TC HRGMv2_3735_19 HRGMv2_3735_19_10 9279 10826 - 1.B.73.1.1
Gene ID: HRGMv2_3735_19_2
Type: CAZyme
Location: 1327 - 2250 (-)
Gene ID: HRGMv2_3735_19_3
Type: CAZyme
Location: 2264 - 3031 (-)
Gene ID: HRGMv2_3735_19_4
Type: CAZyme
Location: 3425 - 3901 (-)
Gene ID: HRGMv2_3735_19_5
Type: TC
Location: 3984 - 4715 (-)
Gene ID: HRGMv2_3735_19_6
Type: TC
Location: 4697 - 6163 (-)
Gene ID: HRGMv2_3735_19_7
Type: pfam
Location: 6193 - 6885 (-)
Gene ID: HRGMv2_3735_19_8
Type: pfam
Location: 6921 - 7709 (-)
Gene ID: HRGMv2_3735_19_9
Type: TC
Location: 7771 - 9201 (-)
Gene ID: HRGMv2_3735_19_10
Type: TC
Location: 9279 - 10826 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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