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Cluster: HRGMv2_3735_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3735_10 HRGMv2_3735_10_26 29674 30525 + 3.A.1.26.7
TC HRGMv2_3735_10 HRGMv2_3735_10_27 30501 31367 + 3.A.1.26.9
TC HRGMv2_3735_10 HRGMv2_3735_10_28 31361 32161 + 3.A.1.25.6
pfam HRGMv2_3735_10 HRGMv2_3735_10_29 32166 32981 + PseudoU_synth_1 | PseudoU_synth_1
TC HRGMv2_3735_10 HRGMv2_3735_10_30 33133 34194 + 2.A.6.2.27
TC HRGMv2_3735_10 HRGMv2_3735_10_31 34191 37247 + 2.A.6.2.17
pfam HRGMv2_3735_10 HRGMv2_3735_10_32 37446 39086 + DUF6020
pfam HRGMv2_3735_10 HRGMv2_3735_10_33 39083 40672 + DUF6020
CAZyme HRGMv2_3735_10 HRGMv2_3735_10_34 40690 41631 + GT2
Gene ID: HRGMv2_3735_10_26
Type: TC
Location: 29674 - 30525 (+)
Gene ID: HRGMv2_3735_10_27
Type: TC
Location: 30501 - 31367 (+)
Gene ID: HRGMv2_3735_10_28
Type: TC
Location: 31361 - 32161 (+)
Gene ID: HRGMv2_3735_10_29
Type: pfam
Location: 32166 - 32981 (+)
Gene ID: HRGMv2_3735_10_30
Type: TC
Location: 33133 - 34194 (+)
Gene ID: HRGMv2_3735_10_31
Type: TC
Location: 34191 - 37247 (+)
Gene ID: HRGMv2_3735_10_32
Type: pfam
Location: 37446 - 39086 (+)
Gene ID: HRGMv2_3735_10_33
Type: pfam
Location: 39083 - 40672 (+)
Gene ID: HRGMv2_3735_10_34
Type: CAZyme
Location: 40690 - 41631 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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