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Cluster: HRGMv2_3734_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3734_5 HRGMv2_3734_5_19 14726 15955 - 2.A.27.1.1
NULL(UNKNOWN) HRGMv2_3734_5 HRGMv2_3734_5_20 16086 16379 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3734_5 HRGMv2_3734_5_21 16478 17119 + 9.B.149.1.11
TC HRGMv2_3734_5 HRGMv2_3734_5_22 17127 17801 + 1.A.62.2.2
pfam HRGMv2_3734_5 HRGMv2_3734_5_23 18205 19203 - Radical_SAM | BATS
pfam HRGMv2_3734_5 HRGMv2_3734_5_24 19402 21186 - Sulfatase
CAZyme HRGMv2_3734_5 HRGMv2_3734_5_25 21192 22280 - GT2
pfam HRGMv2_3734_5 HRGMv2_3734_5_26 22264 24015 - Sulfatase
CAZyme HRGMv2_3734_5 HRGMv2_3734_5_27 24099 25094 - GT8
Gene ID: HRGMv2_3734_5_19
Type: TC
Location: 14726 - 15955 (-)
Gene ID: HRGMv2_3734_5_20
Type:
Location: 16086 - 16379 (-)
Gene ID: HRGMv2_3734_5_21
Type: TC
Location: 16478 - 17119 (+)
Gene ID: HRGMv2_3734_5_22
Type: TC
Location: 17127 - 17801 (+)
Gene ID: HRGMv2_3734_5_23
Type: pfam
Location: 18205 - 19203 (-)
Gene ID: HRGMv2_3734_5_24
Type: pfam
Location: 19402 - 21186 (-)
Gene ID: HRGMv2_3734_5_25
Type: CAZyme
Location: 21192 - 22280 (-)
Gene ID: HRGMv2_3734_5_26
Type: pfam
Location: 22264 - 24015 (-)
Gene ID: HRGMv2_3734_5_27
Type: CAZyme
Location: 24099 - 25094 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_C
→
Class
Negativicutes
→
Order
Veillonellales
→
Family
Dialisteraceae
→
Genus
Dialister
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_3734_5_23 vegetarian > omnivore 3.36258 0.02248

🧭 Explore Read Mapping of CGC

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