Cluster: HRGMv2_3734_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3734
- CGC Family ID: CGCFAM_00279
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3734_3 | HRGMv2_3734_3_11 | 13026 | 13769 | + | GT26 |
| pfam | HRGMv2_3734_3 | HRGMv2_3734_3_12 | 13763 | 14410 | + | PS_Dcarbxylase |
| pfam | HRGMv2_3734_3 | HRGMv2_3734_3_13 | 14410 | 15144 | + | CDP-OH_P_transf |
| CAZyme | HRGMv2_3734_3 | HRGMv2_3734_3_14 | 15141 | 16415 | + | GT2 |
| pfam | HRGMv2_3734_3 | HRGMv2_3734_3_15 | 16604 | 17371 | + | SurE |
| TC | HRGMv2_3734_3 | HRGMv2_3734_3_16 | 17428 | 18402 | - | 9.B.10.1.1 |
Gene ID: HRGMv2_3734_3_11
Type: CAZyme
Location: 13026 - 13769 (+)
Type: CAZyme
Location: 13026 - 13769 (+)
Gene ID: HRGMv2_3734_3_12
Type: pfam
Location: 13763 - 14410 (+)
Type: pfam
Location: 13763 - 14410 (+)
Gene ID: HRGMv2_3734_3_13
Type: pfam
Location: 14410 - 15144 (+)
Type: pfam
Location: 14410 - 15144 (+)
Gene ID: HRGMv2_3734_3_14
Type: CAZyme
Location: 15141 - 16415 (+)
Type: CAZyme
Location: 15141 - 16415 (+)
Gene ID: HRGMv2_3734_3_15
Type: pfam
Location: 16604 - 17371 (+)
Type: pfam
Location: 16604 - 17371 (+)
Gene ID: HRGMv2_3734_3_16
Type: TC
Location: 17428 - 18402 (-)
Type: TC
Location: 17428 - 18402 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Dialisteraceae
Genus
Dialister
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.