dbCAN Logo

Cluster: HRGMv2_3732_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3732_4 HRGMv2_3732_4_88 88407 89525 + GT28
TC HRGMv2_3732_4 HRGMv2_3732_4_89 89669 91012 + 2.A.38.4.3
TC HRGMv2_3732_4 HRGMv2_3732_4_90 91023 91682 + 2.A.38.4.6
STP HRGMv2_3732_4 HRGMv2_3732_4_91 91833 93095 + EPSP_synthase
TC HRGMv2_3732_4 HRGMv2_3732_4_92 93079 94167 + 9.B.157.1.1
pfam HRGMv2_3732_4 HRGMv2_3732_4_93 94312 94617 + Biotin_lipoyl | DUF2118 | Biotin_lipoyl_2
peptidase HRGMv2_3732_4 HRGMv2_3732_4_94 94635 96563 + S55.UNW
TC HRGMv2_3732_4 HRGMv2_3732_4_95 96732 97496 + 3.A.1.27.2
TC HRGMv2_3732_4 HRGMv2_3732_4_96 97505 98266 + 3.A.1.27.2
pfam HRGMv2_3732_4 HRGMv2_3732_4_97 98302 99411 + MlaD
TC HRGMv2_3732_4 HRGMv2_3732_4_98 99449 100909 + 1.B.17.2.6
Gene ID: HRGMv2_3732_4_88
Type: CAZyme
Location: 88407 - 89525 (+)
Gene ID: HRGMv2_3732_4_89
Type: TC
Location: 89669 - 91012 (+)
Gene ID: HRGMv2_3732_4_90
Type: TC
Location: 91023 - 91682 (+)
Gene ID: HRGMv2_3732_4_91
Type: STP
Location: 91833 - 93095 (+)
Gene ID: HRGMv2_3732_4_92
Type: TC
Location: 93079 - 94167 (+)
Gene ID: HRGMv2_3732_4_93
Type: pfam
Location: 94312 - 94617 (+)
Gene ID: HRGMv2_3732_4_94
Type: peptidase
Location: 94635 - 96563 (+)
Gene ID: HRGMv2_3732_4_95
Type: TC
Location: 96732 - 97496 (+)
Gene ID: HRGMv2_3732_4_96
Type: TC
Location: 97505 - 98266 (+)
Gene ID: HRGMv2_3732_4_97
Type: pfam
Location: 98302 - 99411 (+)
Gene ID: HRGMv2_3732_4_98
Type: TC
Location: 99449 - 100909 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List