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Cluster: HRGMv2_3732_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3732_2 HRGMv2_3732_2_259 283676 285094 - 2.A.25.1.5
pfam HRGMv2_3732_2 HRGMv2_3732_2_260 285292 286803 + ResIII | Mrr_cat_2
pfam HRGMv2_3732_2 HRGMv2_3732_2_261 286820 290200 + Helicase_C | N6_Mtase | Eco57I | Type_ISP_C | ISP_coupler
TC HRGMv2_3732_2 HRGMv2_3732_2_262 290252 291823 - 3.A.1.5.38
STP HRGMv2_3732_2 HRGMv2_3732_2_263 291989 292612 + Pribosyltran
STP HRGMv2_3732_2 HRGMv2_3732_2_264 292670 293170 - Nitroreductase | Nitroreductase
CAZyme HRGMv2_3732_2 HRGMv2_3732_2_265 293394 294233 + CE11
Gene ID: HRGMv2_3732_2_259
Type: TC
Location: 283676 - 285094 (-)
Gene ID: HRGMv2_3732_2_260
Type: pfam
Location: 285292 - 286803 (+)
Gene ID: HRGMv2_3732_2_261
Type: pfam
Location: 286820 - 290200 (+)
Gene ID: HRGMv2_3732_2_262
Type: TC
Location: 290252 - 291823 (-)
Gene ID: HRGMv2_3732_2_263
Type: STP
Location: 291989 - 292612 (+)
Gene ID: HRGMv2_3732_2_264
Type: STP
Location: 292670 - 293170 (-)
Gene ID: HRGMv2_3732_2_265
Type: CAZyme
Location: 293394 - 294233 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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