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Cluster: HRGMv2_3732_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3732_2 HRGMv2_3732_2_127 131346 132098 - 3.A.1.5.23
TC HRGMv2_3732_2 HRGMv2_3732_2_128 132248 133036 - 3.A.1.3.27
TC HRGMv2_3732_2 HRGMv2_3732_2_129 133206 133991 - 3.A.1.3.2
TC HRGMv2_3732_2 HRGMv2_3732_2_130 134292 134879 + 9.B.27.2.5
CAZyme HRGMv2_3732_2 HRGMv2_3732_2_131 134883 136397 + GT83
CAZyme HRGMv2_3732_2 HRGMv2_3732_2_132 136346 138025 + GT83
pfam HRGMv2_3732_2 HRGMv2_3732_2_133 138025 138738 + UDG
pfam HRGMv2_3732_2 HRGMv2_3732_2_134 138897 139433 + Flavodoxin_2 | FMN_red
TC HRGMv2_3732_2 HRGMv2_3732_2_135 139436 140239 + 8.A.5.1.4
Gene ID: HRGMv2_3732_2_127
Type: TC
Location: 131346 - 132098 (-)
Gene ID: HRGMv2_3732_2_128
Type: TC
Location: 132248 - 133036 (-)
Gene ID: HRGMv2_3732_2_129
Type: TC
Location: 133206 - 133991 (-)
Gene ID: HRGMv2_3732_2_130
Type: TC
Location: 134292 - 134879 (+)
Gene ID: HRGMv2_3732_2_131
Type: CAZyme
Location: 134883 - 136397 (+)
Gene ID: HRGMv2_3732_2_132
Type: CAZyme
Location: 136346 - 138025 (+)
Gene ID: HRGMv2_3732_2_133
Type: pfam
Location: 138025 - 138738 (+)
Gene ID: HRGMv2_3732_2_134
Type: pfam
Location: 138897 - 139433 (+)
Gene ID: HRGMv2_3732_2_135
Type: TC
Location: 139436 - 140239 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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