Cluster: HRGMv2_3732_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3732
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3732_2 | HRGMv2_3732_2_35 | 37485 | 38816 | - | GT30 |
| TC | HRGMv2_3732_2 | HRGMv2_3732_2_36 | 38816 | 40579 | - | 3.A.1.106.1 |
| CAZyme | HRGMv2_3732_2 | HRGMv2_3732_2_37 | 40569 | 41711 | - | GT19 |
| pfam | HRGMv2_3732_2 | HRGMv2_3732_2_38 | 41708 | 42526 | - | LpxI_C | LpxI_N |
| TC | HRGMv2_3732_2 | HRGMv2_3732_2_39 | 42798 | 44051 | + | 2.A.23.4.1 |
Gene ID: HRGMv2_3732_2_35
Type: CAZyme
Location: 37485 - 38816 (-)
Type: CAZyme
Location: 37485 - 38816 (-)
Gene ID: HRGMv2_3732_2_36
Type: TC
Location: 38816 - 40579 (-)
Type: TC
Location: 38816 - 40579 (-)
Gene ID: HRGMv2_3732_2_37
Type: CAZyme
Location: 40569 - 41711 (-)
Type: CAZyme
Location: 40569 - 41711 (-)
Gene ID: HRGMv2_3732_2_38
Type: pfam
Location: 41708 - 42526 (-)
Type: pfam
Location: 41708 - 42526 (-)
Gene ID: HRGMv2_3732_2_39
Type: TC
Location: 42798 - 44051 (+)
Type: TC
Location: 42798 - 44051 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Dialisteraceae
Genus
UBA1822
Species
UBA1822 sp002314995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.