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Cluster: HRGMv2_3732_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3732_10 HRGMv2_3732_10_33 32455 33015 + 2.A.106.1.3
peptidase HRGMv2_3732_10 HRGMv2_3732_10_34 33129 34499 - M18.UPW
pfam HRGMv2_3732_10 HRGMv2_3732_10_35 34645 35328 - Asp_Glu_race
TC HRGMv2_3732_10 HRGMv2_3732_10_36 35334 36059 - 3.A.1.3.15
TC HRGMv2_3732_10 HRGMv2_3732_10_37 36052 36708 - 3.A.1.3.15
STP HRGMv2_3732_10 HRGMv2_3732_10_38 36727 37566 - SBP_bac_3
pfam HRGMv2_3732_10 HRGMv2_3732_10_39 37612 38448 - Polysacc_deac_1
CAZyme HRGMv2_3732_10 HRGMv2_3732_10_40 38448 39314 - CE4
TF HRGMv2_3732_10 HRGMv2_3732_10_41 39483 40307 - MerR
TC HRGMv2_3732_10 HRGMv2_3732_10_42 40406 41554 + 2.A.1.60.3
Gene ID: HRGMv2_3732_10_33
Type: TC
Location: 32455 - 33015 (+)
Gene ID: HRGMv2_3732_10_34
Type: peptidase
Location: 33129 - 34499 (-)
Gene ID: HRGMv2_3732_10_35
Type: pfam
Location: 34645 - 35328 (-)
Gene ID: HRGMv2_3732_10_36
Type: TC
Location: 35334 - 36059 (-)
Gene ID: HRGMv2_3732_10_37
Type: TC
Location: 36052 - 36708 (-)
Gene ID: HRGMv2_3732_10_38
Type: STP
Location: 36727 - 37566 (-)
Gene ID: HRGMv2_3732_10_39
Type: pfam
Location: 37612 - 38448 (-)
Gene ID: HRGMv2_3732_10_40
Type: CAZyme
Location: 38448 - 39314 (-)
Gene ID: HRGMv2_3732_10_41
Type: TF
Location: 39483 - 40307 (-)
Gene ID: HRGMv2_3732_10_42
Type: TC
Location: 40406 - 41554 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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