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Cluster: HRGMv2_3730_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3730_8 HRGMv2_3730_8_4 5565 6923 + 9.A.40.2.2
NULL(UNKNOWN) HRGMv2_3730_8 HRGMv2_3730_8_5 6920 7711 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3730_8 HRGMv2_3730_8_6 7805 8584 + HTH_59
TC HRGMv2_3730_8 HRGMv2_3730_8_7 8647 9810 - 2.A.1.60.3
TF HRGMv2_3730_8 HRGMv2_3730_8_8 9883 10683 + MerR
TC HRGMv2_3730_8 HRGMv2_3730_8_9 10765 11940 + 3.A.11.1.3
CAZyme HRGMv2_3730_8 HRGMv2_3730_8_10 11999 14053 + GT51
TC HRGMv2_3730_8 HRGMv2_3730_8_11 14158 15267 + 2.A.45.2.6
TC HRGMv2_3730_8 HRGMv2_3730_8_12 15492 16787 + 3.A.1.1.3
TC HRGMv2_3730_8 HRGMv2_3730_8_13 16861 17766 + 3.A.1.1.36
TC HRGMv2_3730_8 HRGMv2_3730_8_14 17756 18577 + 3.A.1.1.39
TC HRGMv2_3730_8 HRGMv2_3730_8_15 18582 19670 + 3.A.1.1.10
Gene ID: HRGMv2_3730_8_4
Type: TC
Location: 5565 - 6923 (+)
Gene ID: HRGMv2_3730_8_5
Type:
Location: 6920 - 7711 (+)
Gene ID: HRGMv2_3730_8_6
Type: pfam
Location: 7805 - 8584 (+)
Gene ID: HRGMv2_3730_8_7
Type: TC
Location: 8647 - 9810 (-)
Gene ID: HRGMv2_3730_8_8
Type: TF
Location: 9883 - 10683 (+)
Gene ID: HRGMv2_3730_8_9
Type: TC
Location: 10765 - 11940 (+)
Gene ID: HRGMv2_3730_8_10
Type: CAZyme
Location: 11999 - 14053 (+)
Gene ID: HRGMv2_3730_8_11
Type: TC
Location: 14158 - 15267 (+)
Gene ID: HRGMv2_3730_8_12
Type: TC
Location: 15492 - 16787 (+)
Gene ID: HRGMv2_3730_8_13
Type: TC
Location: 16861 - 17766 (+)
Gene ID: HRGMv2_3730_8_14
Type: TC
Location: 17756 - 18577 (+)
Gene ID: HRGMv2_3730_8_15
Type: TC
Location: 18582 - 19670 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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