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Cluster: HRGMv2_3730_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3730_6 HRGMv2_3730_6_60 53364 54269 - GT51
STP HRGMv2_3730_6 HRGMv2_3730_6_61 54430 56379 + HATPase_c
pfam HRGMv2_3730_6 HRGMv2_3730_6_62 56484 56888 + DUF805
TC HRGMv2_3730_6 HRGMv2_3730_6_63 57155 58729 + 3.A.1.5.38
TC HRGMv2_3730_6 HRGMv2_3730_6_64 58786 59805 + 3.A.1.5.38
TC HRGMv2_3730_6 HRGMv2_3730_6_65 59802 60662 + 3.A.1.5.38
TC HRGMv2_3730_6 HRGMv2_3730_6_66 60669 61688 + 3.A.1.5.41
TC HRGMv2_3730_6 HRGMv2_3730_6_67 61685 62515 + 3.A.1.5.34
peptidase HRGMv2_3730_6 HRGMv2_3730_6_68 62512 63966 + S12.UPW
TC HRGMv2_3730_6 HRGMv2_3730_6_69 64425 65663 + 1.B.23.1.10
TC HRGMv2_3730_6 HRGMv2_3730_6_70 65714 66526 - 3.A.1.5.35
TC HRGMv2_3730_6 HRGMv2_3730_6_71 66523 67305 - 3.A.1.5.35
TC HRGMv2_3730_6 HRGMv2_3730_6_72 67372 68934 - 3.A.1.5.3
TC HRGMv2_3730_6 HRGMv2_3730_6_73 68967 69800 - 3.A.1.5.38
TC HRGMv2_3730_6 HRGMv2_3730_6_74 69793 70746 - 3.A.1.5.3
pfam HRGMv2_3730_6 HRGMv2_3730_6_75 71021 71956 + AstE_AspA_cat
TC HRGMv2_3730_6 HRGMv2_3730_6_76 72010 72795 - 3.A.1.3.11
TC HRGMv2_3730_6 HRGMv2_3730_6_77 73742 75283 - 3.A.1.5.39
TC HRGMv2_3730_6 HRGMv2_3730_6_78 75280 76224 - 3.A.1.5.16
pfam HRGMv2_3730_6 HRGMv2_3730_6_79 76466 77719 + MFS_1 | MFS_1
TC HRGMv2_3730_6 HRGMv2_3730_6_80 77930 80548 + 1.B.12.2.4
pfam HRGMv2_3730_6 HRGMv2_3730_6_81 80604 81794 - RuBisCO_large
CAZyme HRGMv2_3730_6 HRGMv2_3730_6_82 81834 82790 - GT2
TC HRGMv2_3730_6 HRGMv2_3730_6_83 82955 84073 - 3.A.1.105.15
TC HRGMv2_3730_6 HRGMv2_3730_6_84 84078 84974 - 3.A.1.105.15
Gene ID: HRGMv2_3730_6_60
Type: CAZyme
Location: 53364 - 54269 (-)
Gene ID: HRGMv2_3730_6_61
Type: STP
Location: 54430 - 56379 (+)
Gene ID: HRGMv2_3730_6_62
Type: pfam
Location: 56484 - 56888 (+)
Gene ID: HRGMv2_3730_6_63
Type: TC
Location: 57155 - 58729 (+)
Gene ID: HRGMv2_3730_6_64
Type: TC
Location: 58786 - 59805 (+)
Gene ID: HRGMv2_3730_6_65
Type: TC
Location: 59802 - 60662 (+)
Gene ID: HRGMv2_3730_6_66
Type: TC
Location: 60669 - 61688 (+)
Gene ID: HRGMv2_3730_6_67
Type: TC
Location: 61685 - 62515 (+)
Gene ID: HRGMv2_3730_6_68
Type: peptidase
Location: 62512 - 63966 (+)
Gene ID: HRGMv2_3730_6_69
Type: TC
Location: 64425 - 65663 (+)
Gene ID: HRGMv2_3730_6_70
Type: TC
Location: 65714 - 66526 (-)
Gene ID: HRGMv2_3730_6_71
Type: TC
Location: 66523 - 67305 (-)
Gene ID: HRGMv2_3730_6_72
Type: TC
Location: 67372 - 68934 (-)
Gene ID: HRGMv2_3730_6_73
Type: TC
Location: 68967 - 69800 (-)
Gene ID: HRGMv2_3730_6_74
Type: TC
Location: 69793 - 70746 (-)
Gene ID: HRGMv2_3730_6_75
Type: pfam
Location: 71021 - 71956 (+)
Gene ID: HRGMv2_3730_6_76
Type: TC
Location: 72010 - 72795 (-)
Gene ID: HRGMv2_3730_6_77
Type: TC
Location: 73742 - 75283 (-)
Gene ID: HRGMv2_3730_6_78
Type: TC
Location: 75280 - 76224 (-)
Gene ID: HRGMv2_3730_6_79
Type: pfam
Location: 76466 - 77719 (+)
Gene ID: HRGMv2_3730_6_80
Type: TC
Location: 77930 - 80548 (+)
Gene ID: HRGMv2_3730_6_81
Type: pfam
Location: 80604 - 81794 (-)
Gene ID: HRGMv2_3730_6_82
Type: CAZyme
Location: 81834 - 82790 (-)
Gene ID: HRGMv2_3730_6_83
Type: TC
Location: 82955 - 84073 (-)
Gene ID: HRGMv2_3730_6_84
Type: TC
Location: 84078 - 84974 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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