Cluster: HRGMv2_3730_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3730
- CGC Family ID: CGCFAM_00340
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3730_10 | HRGMv2_3730_10_51 | 50910 | 52241 | - | GT30 |
| TC | HRGMv2_3730_10 | HRGMv2_3730_10_52 | 52241 | 54004 | - | 3.A.1.106.1 |
| CAZyme | HRGMv2_3730_10 | HRGMv2_3730_10_53 | 53994 | 55136 | - | GT19 |
| pfam | HRGMv2_3730_10 | HRGMv2_3730_10_54 | 55133 | 55951 | - | LpxI_C | LpxI_N |
| TC | HRGMv2_3730_10 | HRGMv2_3730_10_55 | 56211 | 57461 | + | 2.A.23.4.1 |
| TC | HRGMv2_3730_10 | HRGMv2_3730_10_56 | 57570 | 58877 | - | 1.B.23.1.10 |
Gene ID: HRGMv2_3730_10_51
Type: CAZyme
Location: 50910 - 52241 (-)
Type: CAZyme
Location: 50910 - 52241 (-)
Gene ID: HRGMv2_3730_10_52
Type: TC
Location: 52241 - 54004 (-)
Type: TC
Location: 52241 - 54004 (-)
Gene ID: HRGMv2_3730_10_53
Type: CAZyme
Location: 53994 - 55136 (-)
Type: CAZyme
Location: 53994 - 55136 (-)
Gene ID: HRGMv2_3730_10_54
Type: pfam
Location: 55133 - 55951 (-)
Type: pfam
Location: 55133 - 55951 (-)
Gene ID: HRGMv2_3730_10_55
Type: TC
Location: 56211 - 57461 (+)
Type: TC
Location: 56211 - 57461 (+)
Gene ID: HRGMv2_3730_10_56
Type: TC
Location: 57570 - 58877 (-)
Type: TC
Location: 57570 - 58877 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Dialisteraceae
Genus
UBA1822
Species
UBA1822 sp958348245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.