Cluster: HRGMv2_3729_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3729
- CGC Family ID: CGCFAM_00340
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3729_1 | HRGMv2_3729_1_460 | 473743 | 475074 | - | GT30 |
| TC | HRGMv2_3729_1 | HRGMv2_3729_1_461 | 475074 | 476837 | - | 3.A.1.106.1 |
| CAZyme | HRGMv2_3729_1 | HRGMv2_3729_1_462 | 476824 | 477969 | - | GT19 |
| pfam | HRGMv2_3729_1 | HRGMv2_3729_1_463 | 477966 | 478784 | - | LpxI_C | LpxI_N |
| TC | HRGMv2_3729_1 | HRGMv2_3729_1_464 | 479129 | 480382 | + | 2.A.23.4.1 |
Gene ID: HRGMv2_3729_1_460
Type: CAZyme
Location: 473743 - 475074 (-)
Type: CAZyme
Location: 473743 - 475074 (-)
Gene ID: HRGMv2_3729_1_461
Type: TC
Location: 475074 - 476837 (-)
Type: TC
Location: 475074 - 476837 (-)
Gene ID: HRGMv2_3729_1_462
Type: CAZyme
Location: 476824 - 477969 (-)
Type: CAZyme
Location: 476824 - 477969 (-)
Gene ID: HRGMv2_3729_1_463
Type: pfam
Location: 477966 - 478784 (-)
Type: pfam
Location: 477966 - 478784 (-)
Gene ID: HRGMv2_3729_1_464
Type: TC
Location: 479129 - 480382 (+)
Type: TC
Location: 479129 - 480382 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Dialisteraceae
Genus
UBA1822
Species
UBA1822 sp900545365
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.