Cluster: HRGMv2_3729_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3729
- CGC Family ID: CGCFAM_03436
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3729_1 | HRGMv2_3729_1_434 | 449982 | 451022 | + | 3.A.1.24.1 |
| TC | HRGMv2_3729_1 | HRGMv2_3729_1_435 | 451003 | 451656 | + | 3.A.1.24.5 |
| TC | HRGMv2_3729_1 | HRGMv2_3729_1_436 | 451670 | 452569 | + | 3.A.1.24.1 |
| pfam | HRGMv2_3729_1 | HRGMv2_3729_1_437 | 452621 | 453229 | - | RNase_H | Cauli_VI | RVT_3 |
| pfam | HRGMv2_3729_1 | HRGMv2_3729_1_438 | 453342 | 454544 | + | MFS_3 | MFS_1 |
| CAZyme | HRGMv2_3729_1 | HRGMv2_3729_1_439 | 454584 | 455678 | - | GT9 |
Gene ID: HRGMv2_3729_1_434
Type: TC
Location: 449982 - 451022 (+)
Type: TC
Location: 449982 - 451022 (+)
Gene ID: HRGMv2_3729_1_435
Type: TC
Location: 451003 - 451656 (+)
Type: TC
Location: 451003 - 451656 (+)
Gene ID: HRGMv2_3729_1_436
Type: TC
Location: 451670 - 452569 (+)
Type: TC
Location: 451670 - 452569 (+)
Gene ID: HRGMv2_3729_1_437
Type: pfam
Location: 452621 - 453229 (-)
Type: pfam
Location: 452621 - 453229 (-)
Gene ID: HRGMv2_3729_1_438
Type: pfam
Location: 453342 - 454544 (+)
Type: pfam
Location: 453342 - 454544 (+)
Gene ID: HRGMv2_3729_1_439
Type: CAZyme
Location: 454584 - 455678 (-)
Type: CAZyme
Location: 454584 - 455678 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Dialisteraceae
Genus
UBA1822
Species
UBA1822 sp900545365
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.