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Cluster: HRGMv2_3729_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3729_1 HRGMv2_3729_1_343 349485 350945 - 1.B.17.2.6
pfam HRGMv2_3729_1 HRGMv2_3729_1_344 350970 352118 - MlaD
TC HRGMv2_3729_1 HRGMv2_3729_1_345 352115 352870 - 3.A.1.27.2
TC HRGMv2_3729_1 HRGMv2_3729_1_346 352880 353644 - 3.A.1.27.2
peptidase HRGMv2_3729_1 HRGMv2_3729_1_347 353859 355787 - S55.UNW
pfam HRGMv2_3729_1 HRGMv2_3729_1_348 355841 356146 - Biotin_lipoyl | DUF2118
TC HRGMv2_3729_1 HRGMv2_3729_1_349 356267 357352 - 9.B.157.1.1
STP HRGMv2_3729_1 HRGMv2_3729_1_350 357333 358598 - EPSP_synthase
TC HRGMv2_3729_1 HRGMv2_3729_1_351 358747 359406 - 2.A.38.4.4
TC HRGMv2_3729_1 HRGMv2_3729_1_352 359417 360760 - 2.A.38.4.3
CAZyme HRGMv2_3729_1 HRGMv2_3729_1_353 360899 362005 - GT28
Gene ID: HRGMv2_3729_1_343
Type: TC
Location: 349485 - 350945 (-)
Gene ID: HRGMv2_3729_1_344
Type: pfam
Location: 350970 - 352118 (-)
Gene ID: HRGMv2_3729_1_345
Type: TC
Location: 352115 - 352870 (-)
Gene ID: HRGMv2_3729_1_346
Type: TC
Location: 352880 - 353644 (-)
Gene ID: HRGMv2_3729_1_347
Type: peptidase
Location: 353859 - 355787 (-)
Gene ID: HRGMv2_3729_1_348
Type: pfam
Location: 355841 - 356146 (-)
Gene ID: HRGMv2_3729_1_349
Type: TC
Location: 356267 - 357352 (-)
Gene ID: HRGMv2_3729_1_350
Type: STP
Location: 357333 - 358598 (-)
Gene ID: HRGMv2_3729_1_351
Type: TC
Location: 358747 - 359406 (-)
Gene ID: HRGMv2_3729_1_352
Type: TC
Location: 359417 - 360760 (-)
Gene ID: HRGMv2_3729_1_353
Type: CAZyme
Location: 360899 - 362005 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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