Cluster: HRGMv2_3729_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3729
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3729_13 | HRGMv2_3729_13_3 | 920 | 1786 | + | CE4 |
| CAZyme | HRGMv2_3729_13 | HRGMv2_3729_13_4 | 1786 | 2622 | + | CE4 |
| STP | HRGMv2_3729_13 | HRGMv2_3729_13_5 | 2670 | 3509 | + | SBP_bac_3 |
| TC | HRGMv2_3729_13 | HRGMv2_3729_13_6 | 3528 | 4184 | + | 3.A.1.3.15 |
| TC | HRGMv2_3729_13 | HRGMv2_3729_13_7 | 4177 | 4902 | + | 3.A.1.3.15 |
Gene ID: HRGMv2_3729_13_3
Type: CAZyme
Location: 920 - 1786 (+)
Type: CAZyme
Location: 920 - 1786 (+)
Gene ID: HRGMv2_3729_13_4
Type: CAZyme
Location: 1786 - 2622 (+)
Type: CAZyme
Location: 1786 - 2622 (+)
Gene ID: HRGMv2_3729_13_5
Type: STP
Location: 2670 - 3509 (+)
Type: STP
Location: 2670 - 3509 (+)
Gene ID: HRGMv2_3729_13_6
Type: TC
Location: 3528 - 4184 (+)
Type: TC
Location: 3528 - 4184 (+)
Gene ID: HRGMv2_3729_13_7
Type: TC
Location: 4177 - 4902 (+)
Type: TC
Location: 4177 - 4902 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Dialisteraceae
Genus
UBA1822
Species
UBA1822 sp900545365
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.