Cluster: HRGMv2_3724_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3724
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3724_47 | HRGMv2_3724_47_8 | 6156 | 7508 | - | 3.B.1.1.1 |
| NULL(UNKNOWN) | HRGMv2_3724_47 | HRGMv2_3724_47_9 | 8033 | 8359 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3724_47 | HRGMv2_3724_47_10 | 8346 | 9518 | - | GT9 |
| NULL(UNKNOWN) | HRGMv2_3724_47 | HRGMv2_3724_47_11 | 9588 | 10529 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3724_47 | HRGMv2_3724_47_12 | 10538 | 11476 | - | NAGPA |
| CAZyme | HRGMv2_3724_47 | HRGMv2_3724_47_13 | 11488 | 12291 | - | CE4 |
Gene ID: HRGMv2_3724_47_8
Type: TC
Location: 6156 - 7508 (-)
Type: TC
Location: 6156 - 7508 (-)
Gene ID: HRGMv2_3724_47_9
Type:
Location: 8033 - 8359 (-)
Type:
Location: 8033 - 8359 (-)
Gene ID: HRGMv2_3724_47_10
Type: CAZyme
Location: 8346 - 9518 (-)
Type: CAZyme
Location: 8346 - 9518 (-)
Gene ID: HRGMv2_3724_47_11
Type:
Location: 9588 - 10529 (-)
Type:
Location: 9588 - 10529 (-)
Gene ID: HRGMv2_3724_47_12
Type: pfam
Location: 10538 - 11476 (-)
Type: pfam
Location: 10538 - 11476 (-)
Gene ID: HRGMv2_3724_47_13
Type: CAZyme
Location: 11488 - 12291 (-)
Type: CAZyme
Location: 11488 - 12291 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Species
Veillonella fallax
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.