Cluster: HRGMv2_3724_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3724
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3724_26 | HRGMv2_3724_26_5 | 3745 | 4971 | + | 3.A.11.1.3 |
| TC | HRGMv2_3724_26 | HRGMv2_3724_26_6 | 4961 | 7360 | + | 3.A.7.7.1 |
| STP | HRGMv2_3724_26 | HRGMv2_3724_26_7 | 7353 | 8669 | + | Pyr_redox_2 |
| pfam | HRGMv2_3724_26 | HRGMv2_3724_26_8 | 8803 | 9627 | - | LGT |
| CAZyme | HRGMv2_3724_26 | HRGMv2_3724_26_9 | 9781 | 11496 | + | GH18 |
Gene ID: HRGMv2_3724_26_5
Type: TC
Location: 3745 - 4971 (+)
Type: TC
Location: 3745 - 4971 (+)
Gene ID: HRGMv2_3724_26_6
Type: TC
Location: 4961 - 7360 (+)
Type: TC
Location: 4961 - 7360 (+)
Gene ID: HRGMv2_3724_26_7
Type: STP
Location: 7353 - 8669 (+)
Type: STP
Location: 7353 - 8669 (+)
Gene ID: HRGMv2_3724_26_8
Type: pfam
Location: 8803 - 9627 (-)
Type: pfam
Location: 8803 - 9627 (-)
Gene ID: HRGMv2_3724_26_9
Type: CAZyme
Location: 9781 - 11496 (+)
Type: CAZyme
Location: 9781 - 11496 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Species
Veillonella fallax
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.