Cluster: HRGMv2_3724_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3724
- CGC Family ID: CGCFAM_01953
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3724_10 | HRGMv2_3724_10_16 | 18550 | 19629 | - | 9.B.124.1.2 |
| NULL(UNKNOWN) | HRGMv2_3724_10 | HRGMv2_3724_10_17 | 19710 | 20501 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3724_10 | HRGMv2_3724_10_18 | 20966 | 21739 | - | 3.A.1.16.3 |
| TC | HRGMv2_3724_10 | HRGMv2_3724_10_19 | 21751 | 22503 | - | 3.A.1.17.1 |
| TC | HRGMv2_3724_10 | HRGMv2_3724_10_20 | 22514 | 23467 | - | 3.A.1.17.4 |
| CAZyme | HRGMv2_3724_10 | HRGMv2_3724_10_21 | 23819 | 25447 | - | GT83 |
| TC | HRGMv2_3724_10 | HRGMv2_3724_10_22 | 25458 | 26045 | - | 9.B.27.2.5 |
Gene ID: HRGMv2_3724_10_16
Type: TC
Location: 18550 - 19629 (-)
Type: TC
Location: 18550 - 19629 (-)
Gene ID: HRGMv2_3724_10_17
Type:
Location: 19710 - 20501 (-)
Type:
Location: 19710 - 20501 (-)
Gene ID: HRGMv2_3724_10_18
Type: TC
Location: 20966 - 21739 (-)
Type: TC
Location: 20966 - 21739 (-)
Gene ID: HRGMv2_3724_10_19
Type: TC
Location: 21751 - 22503 (-)
Type: TC
Location: 21751 - 22503 (-)
Gene ID: HRGMv2_3724_10_20
Type: TC
Location: 22514 - 23467 (-)
Type: TC
Location: 22514 - 23467 (-)
Gene ID: HRGMv2_3724_10_21
Type: CAZyme
Location: 23819 - 25447 (-)
Type: CAZyme
Location: 23819 - 25447 (-)
Gene ID: HRGMv2_3724_10_22
Type: TC
Location: 25458 - 26045 (-)
Type: TC
Location: 25458 - 26045 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Species
Veillonella fallax
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.