Cluster: HRGMv2_3721_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3721
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3721_46 | HRGMv2_3721_46_2 | 1884 | 3890 | - | 3.A.1.120.6 |
| NULL(UNKNOWN) | HRGMv2_3721_46 | HRGMv2_3721_46_3 | 4003 | 4323 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3721_46 | HRGMv2_3721_46_4 | 4453 | 5616 | - | GT28 |
| pfam | HRGMv2_3721_46 | HRGMv2_3721_46_5 | 5699 | 5998 | - | Bac_DNA_binding | HU-HIG |
| pfam | HRGMv2_3721_46 | HRGMv2_3721_46_6 | 6050 | 6832 | - | PRA-PH | MazG | MazG |
| TC | HRGMv2_3721_46 | HRGMv2_3721_46_7 | 6816 | 8423 | - | 2.A.66.2.14 |
Gene ID: HRGMv2_3721_46_2
Type: TC
Location: 1884 - 3890 (-)
Type: TC
Location: 1884 - 3890 (-)
Gene ID: HRGMv2_3721_46_3
Type:
Location: 4003 - 4323 (+)
Type:
Location: 4003 - 4323 (+)
Gene ID: HRGMv2_3721_46_4
Type: CAZyme
Location: 4453 - 5616 (-)
Type: CAZyme
Location: 4453 - 5616 (-)
Gene ID: HRGMv2_3721_46_5
Type: pfam
Location: 5699 - 5998 (-)
Type: pfam
Location: 5699 - 5998 (-)
Gene ID: HRGMv2_3721_46_6
Type: pfam
Location: 6050 - 6832 (-)
Type: pfam
Location: 6050 - 6832 (-)
Gene ID: HRGMv2_3721_46_7
Type: TC
Location: 6816 - 8423 (-)
Type: TC
Location: 6816 - 8423 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Species
Veillonella sp019414865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.