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Cluster: HRGMv2_3716_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3716_4 HRGMv2_3716_4_95 108727 110709 - 4.A.2.1.4
STP HRGMv2_3716_4 HRGMv2_3716_4_96 110743 111657 - PfkB
TC HRGMv2_3716_4 HRGMv2_3716_4_97 111738 113075 - 2.A.35.1.2
pfam HRGMv2_3716_4 HRGMv2_3716_4_98 113137 113970 - DAP_epimerase | DAP_epimerase | Pro_racemase
TC HRGMv2_3716_4 HRGMv2_3716_4_99 114235 115962 + 8.A.7.1.1
TC HRGMv2_3716_4 HRGMv2_3716_4_100 116112 116372 + 8.A.8.1.1
pfam HRGMv2_3716_4 HRGMv2_3716_4_101 116564 116842 - Trns_repr_metal
CAZyme HRGMv2_3716_4 HRGMv2_3716_4_102 117172 117978 + GT51
Gene ID: HRGMv2_3716_4_95
Type: TC
Location: 108727 - 110709 (-)
Gene ID: HRGMv2_3716_4_96
Type: STP
Location: 110743 - 111657 (-)
Gene ID: HRGMv2_3716_4_97
Type: TC
Location: 111738 - 113075 (-)
Gene ID: HRGMv2_3716_4_98
Type: pfam
Location: 113137 - 113970 (-)
Gene ID: HRGMv2_3716_4_99
Type: TC
Location: 114235 - 115962 (+)
Gene ID: HRGMv2_3716_4_100
Type: TC
Location: 116112 - 116372 (+)
Gene ID: HRGMv2_3716_4_101
Type: pfam
Location: 116564 - 116842 (-)
Gene ID: HRGMv2_3716_4_102
Type: CAZyme
Location: 117172 - 117978 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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