Cluster: HRGMv2_3716_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3716
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3716_3 | HRGMv2_3716_3_60 | 72440 | 73792 | - | 3.B.1.1.1 |
| NULL(UNKNOWN) | HRGMv2_3716_3 | HRGMv2_3716_3_61 | 74320 | 74646 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3716_3 | HRGMv2_3716_3_62 | 74633 | 75805 | - | GT9 |
| NULL(UNKNOWN) | HRGMv2_3716_3 | HRGMv2_3716_3_63 | 75875 | 76816 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3716_3 | HRGMv2_3716_3_64 | 76825 | 77763 | - | NAGPA |
| CAZyme | HRGMv2_3716_3 | HRGMv2_3716_3_65 | 77775 | 78578 | - | CE4 |
Gene ID: HRGMv2_3716_3_60
Type: TC
Location: 72440 - 73792 (-)
Type: TC
Location: 72440 - 73792 (-)
Gene ID: HRGMv2_3716_3_61
Type:
Location: 74320 - 74646 (-)
Type:
Location: 74320 - 74646 (-)
Gene ID: HRGMv2_3716_3_62
Type: CAZyme
Location: 74633 - 75805 (-)
Type: CAZyme
Location: 74633 - 75805 (-)
Gene ID: HRGMv2_3716_3_63
Type:
Location: 75875 - 76816 (-)
Type:
Location: 75875 - 76816 (-)
Gene ID: HRGMv2_3716_3_64
Type: pfam
Location: 76825 - 77763 (-)
Type: pfam
Location: 76825 - 77763 (-)
Gene ID: HRGMv2_3716_3_65
Type: CAZyme
Location: 77775 - 78578 (-)
Type: CAZyme
Location: 77775 - 78578 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Species
Veillonella dispar
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.