Cluster: HRGMv2_3716_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3716
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3716_1 | HRGMv2_3716_1_196 | 208440 | 209687 | + | 3.A.11.1.3 |
| TC | HRGMv2_3716_1 | HRGMv2_3716_1_197 | 209677 | 212076 | + | 3.A.7.7.1 |
| STP | HRGMv2_3716_1 | HRGMv2_3716_1_198 | 212069 | 213385 | + | Pyr_redox_2 |
| pfam | HRGMv2_3716_1 | HRGMv2_3716_1_199 | 213520 | 214344 | - | LGT |
| CAZyme | HRGMv2_3716_1 | HRGMv2_3716_1_200 | 214498 | 216213 | + | GH18 |
Gene ID: HRGMv2_3716_1_196
Type: TC
Location: 208440 - 209687 (+)
Type: TC
Location: 208440 - 209687 (+)
Gene ID: HRGMv2_3716_1_197
Type: TC
Location: 209677 - 212076 (+)
Type: TC
Location: 209677 - 212076 (+)
Gene ID: HRGMv2_3716_1_198
Type: STP
Location: 212069 - 213385 (+)
Type: STP
Location: 212069 - 213385 (+)
Gene ID: HRGMv2_3716_1_199
Type: pfam
Location: 213520 - 214344 (-)
Type: pfam
Location: 213520 - 214344 (-)
Gene ID: HRGMv2_3716_1_200
Type: CAZyme
Location: 214498 - 216213 (+)
Type: CAZyme
Location: 214498 - 216213 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Species
Veillonella dispar
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.