Cluster: HRGMv2_3716_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3716
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3716_13 | HRGMv2_3716_13_43 | 41103 | 41813 | + | 1.C.82.1.1 |
| pfam | HRGMv2_3716_13 | HRGMv2_3716_13_44 | 41988 | 42494 | + | Ribosomal_L10 |
| pfam | HRGMv2_3716_13 | HRGMv2_3716_13_45 | 42565 | 42933 | + | Ribosomal_L12 | Ribosomal_L12_N |
| CAZyme | HRGMv2_3716_13 | HRGMv2_3716_13_46 | 43037 | 44653 | - | GT83 |
Gene ID: HRGMv2_3716_13_43
Type: TC
Location: 41103 - 41813 (+)
Type: TC
Location: 41103 - 41813 (+)
Gene ID: HRGMv2_3716_13_44
Type: pfam
Location: 41988 - 42494 (+)
Type: pfam
Location: 41988 - 42494 (+)
Gene ID: HRGMv2_3716_13_45
Type: pfam
Location: 42565 - 42933 (+)
Type: pfam
Location: 42565 - 42933 (+)
Gene ID: HRGMv2_3716_13_46
Type: CAZyme
Location: 43037 - 44653 (-)
Type: CAZyme
Location: 43037 - 44653 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Species
Veillonella dispar
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.