Cluster: HRGMv2_3716_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3716
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3716_5 | HRGMv2_3716_5_121 | 128815 | 132399 | - | 3.A.1.129.1 |
| TC | HRGMv2_3716_5 | HRGMv2_3716_5_122 | 132589 | 133608 | - | 3.D.4.3.2 |
| TC | HRGMv2_3716_5 | HRGMv2_3716_5_123 | 133599 | 134987 | - | 3.D.4.3.2 |
| TF | HRGMv2_3716_5 | HRGMv2_3716_5_124 | 135051 | 135503 | - | Rrf2 |
| pfam | HRGMv2_3716_5 | HRGMv2_3716_5_125 | 135725 | 136219 | - | MoCF_biosynth |
| CAZyme | HRGMv2_3716_5 | HRGMv2_3716_5_126 | 136228 | 137088 | - | CE4 |
Gene ID: HRGMv2_3716_5_121
Type: TC
Location: 128815 - 132399 (-)
Type: TC
Location: 128815 - 132399 (-)
Gene ID: HRGMv2_3716_5_122
Type: TC
Location: 132589 - 133608 (-)
Type: TC
Location: 132589 - 133608 (-)
Gene ID: HRGMv2_3716_5_123
Type: TC
Location: 133599 - 134987 (-)
Type: TC
Location: 133599 - 134987 (-)
Gene ID: HRGMv2_3716_5_124
Type: TF
Location: 135051 - 135503 (-)
Type: TF
Location: 135051 - 135503 (-)
Gene ID: HRGMv2_3716_5_125
Type: pfam
Location: 135725 - 136219 (-)
Type: pfam
Location: 135725 - 136219 (-)
Gene ID: HRGMv2_3716_5_126
Type: CAZyme
Location: 136228 - 137088 (-)
Type: CAZyme
Location: 136228 - 137088 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Species
Veillonella dispar
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.