Cluster: HRGMv2_3702_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3702
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3702_4 | HRGMv2_3702_4_75 | 86167 | 87576 | - | 1.B.23.1.18 |
| pfam | HRGMv2_3702_4 | HRGMv2_3702_4_76 | 87594 | 88373 | - | S6PP | Hydrolase_3 |
| CAZyme | HRGMv2_3702_4 | HRGMv2_3702_4_77 | 88385 | 90052 | - | GH13_31 |
| TC | HRGMv2_3702_4 | HRGMv2_3702_4_78 | 90062 | 92224 | - | 4.A.1.1.8 |
Gene ID: HRGMv2_3702_4_75
Type: TC
Location: 86167 - 87576 (-)
Type: TC
Location: 86167 - 87576 (-)
Gene ID: HRGMv2_3702_4_76
Type: pfam
Location: 87594 - 88373 (-)
Type: pfam
Location: 87594 - 88373 (-)
Gene ID: HRGMv2_3702_4_77
Type: CAZyme
Location: 88385 - 90052 (-)
Type: CAZyme
Location: 88385 - 90052 (-)
Gene ID: HRGMv2_3702_4_78
Type: TC
Location: 90062 - 92224 (-)
Type: TC
Location: 90062 - 92224 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Species
Megasphaera sp001546855
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.