Cluster: HRGMv2_3702_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3702
- CGC Family ID: CGCFAM_04439
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3702_4 | HRGMv2_3702_4_54 | 62308 | 63144 | + | 3.A.1.132.3 |
| pfam | HRGMv2_3702_4 | HRGMv2_3702_4_55 | 63230 | 65074 | - | Alk_phosphatase |
| pfam | HRGMv2_3702_4 | HRGMv2_3702_4_56 | 65200 | 66084 | + | ROK |
| CAZyme | HRGMv2_3702_4 | HRGMv2_3702_4_57 | 66156 | 67313 | - | CE9 |
Gene ID: HRGMv2_3702_4_54
Type: TC
Location: 62308 - 63144 (+)
Type: TC
Location: 62308 - 63144 (+)
Gene ID: HRGMv2_3702_4_55
Type: pfam
Location: 63230 - 65074 (-)
Type: pfam
Location: 63230 - 65074 (-)
Gene ID: HRGMv2_3702_4_56
Type: pfam
Location: 65200 - 66084 (+)
Type: pfam
Location: 65200 - 66084 (+)
Gene ID: HRGMv2_3702_4_57
Type: CAZyme
Location: 66156 - 67313 (-)
Type: CAZyme
Location: 66156 - 67313 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Species
Megasphaera sp001546855
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.