Cluster: HRGMv2_3702_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3702
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3702_4 | HRGMv2_3702_4_5 | 5160 | 5879 | - | 9.B.20.1.4 |
| NULL(UNKNOWN) | HRGMv2_3702_4 | HRGMv2_3702_4_6 | 6262 | 7218 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3702_4 | HRGMv2_3702_4_7 | 7306 | 7899 | + | 9.B.27.2.5 |
| CAZyme | HRGMv2_3702_4 | HRGMv2_3702_4_8 | 7896 | 9455 | + | GT83 |
| CAZyme | HRGMv2_3702_4 | HRGMv2_3702_4_9 | 9465 | 11075 | + | GT83 |
Gene ID: HRGMv2_3702_4_5
Type: TC
Location: 5160 - 5879 (-)
Type: TC
Location: 5160 - 5879 (-)
Gene ID: HRGMv2_3702_4_6
Type:
Location: 6262 - 7218 (+)
Type:
Location: 6262 - 7218 (+)
Gene ID: HRGMv2_3702_4_7
Type: TC
Location: 7306 - 7899 (+)
Type: TC
Location: 7306 - 7899 (+)
Gene ID: HRGMv2_3702_4_8
Type: CAZyme
Location: 7896 - 9455 (+)
Type: CAZyme
Location: 7896 - 9455 (+)
Gene ID: HRGMv2_3702_4_9
Type: CAZyme
Location: 9465 - 11075 (+)
Type: CAZyme
Location: 9465 - 11075 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Species
Megasphaera sp001546855
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.