Cluster: HRGMv2_3702_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3702
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3702_1 | HRGMv2_3702_1_251 | 281897 | 283018 | - | GT28 |
| pfam | HRGMv2_3702_1 | HRGMv2_3702_1_252 | 283054 | 284421 | - | Mur_ligase_C | Mur_ligase_M |
| TC | HRGMv2_3702_1 | HRGMv2_3702_1_253 | 284476 | 285441 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_3702_1_251
Type: CAZyme
Location: 281897 - 283018 (-)
Type: CAZyme
Location: 281897 - 283018 (-)
Gene ID: HRGMv2_3702_1_252
Type: pfam
Location: 283054 - 284421 (-)
Type: pfam
Location: 283054 - 284421 (-)
Gene ID: HRGMv2_3702_1_253
Type: TC
Location: 284476 - 285441 (-)
Type: TC
Location: 284476 - 285441 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Species
Megasphaera sp001546855
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.