Cluster: HRGMv2_3702_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3702
- CGC Family ID: CGCFAM_01389
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3702_10 | HRGMv2_3702_10_20 | 23591 | 24988 | + | AA4 |
| pfam | HRGMv2_3702_10 | HRGMv2_3702_10_21 | 25000 | 25899 | + | Radical_SAM |
| TC | HRGMv2_3702_10 | HRGMv2_3702_10_22 | 26006 | 27883 | - | 2.A.114.1.5 |
| TC | HRGMv2_3702_10 | HRGMv2_3702_10_23 | 28325 | 30202 | - | 2.A.114.1.5 |
Gene ID: HRGMv2_3702_10_20
Type: CAZyme
Location: 23591 - 24988 (+)
Type: CAZyme
Location: 23591 - 24988 (+)
Gene ID: HRGMv2_3702_10_21
Type: pfam
Location: 25000 - 25899 (+)
Type: pfam
Location: 25000 - 25899 (+)
Gene ID: HRGMv2_3702_10_22
Type: TC
Location: 26006 - 27883 (-)
Type: TC
Location: 26006 - 27883 (-)
Gene ID: HRGMv2_3702_10_23
Type: TC
Location: 28325 - 30202 (-)
Type: TC
Location: 28325 - 30202 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Species
Megasphaera sp001546855
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.