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Cluster: HRGMv2_3702_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3702_8 HRGMv2_3702_8_68 72656 72976 + 2.A.7.1.4
pfam HRGMv2_3702_8 HRGMv2_3702_8_69 73077 73754 + CpXC
pfam HRGMv2_3702_8 HRGMv2_3702_8_70 73770 74171 + CGGC
CAZyme HRGMv2_3702_8 HRGMv2_3702_8_71 74161 75369 + GH73
TC HRGMv2_3702_8 HRGMv2_3702_8_72 75392 76039 - 3.A.1.23.7
pfam HRGMv2_3702_8 HRGMv2_3702_8_73 76036 76845 - CbiQ
TC HRGMv2_3702_8 HRGMv2_3702_8_74 76858 77862 - 3.A.1.23.1
pfam HRGMv2_3702_8 HRGMv2_3702_8_75 78356 79081 + QueH
TC HRGMv2_3702_8 HRGMv2_3702_8_76 79261 82638 + 1.B.12.2.6
TF HRGMv2_3702_8 HRGMv2_3702_8_77 82759 83655 - HTH_1
pfam HRGMv2_3702_8 HRGMv2_3702_8_78 83798 84961 + PrpF
TC HRGMv2_3702_8 HRGMv2_3702_8_79 84977 86386 + 2.A.3.1.6
Gene ID: HRGMv2_3702_8_68
Type: TC
Location: 72656 - 72976 (+)
Gene ID: HRGMv2_3702_8_69
Type: pfam
Location: 73077 - 73754 (+)
Gene ID: HRGMv2_3702_8_70
Type: pfam
Location: 73770 - 74171 (+)
Gene ID: HRGMv2_3702_8_71
Type: CAZyme
Location: 74161 - 75369 (+)
Gene ID: HRGMv2_3702_8_72
Type: TC
Location: 75392 - 76039 (-)
Gene ID: HRGMv2_3702_8_73
Type: pfam
Location: 76036 - 76845 (-)
Gene ID: HRGMv2_3702_8_74
Type: TC
Location: 76858 - 77862 (-)
Gene ID: HRGMv2_3702_8_75
Type: pfam
Location: 78356 - 79081 (+)
Gene ID: HRGMv2_3702_8_76
Type: TC
Location: 79261 - 82638 (+)
Gene ID: HRGMv2_3702_8_77
Type: TF
Location: 82759 - 83655 (-)
Gene ID: HRGMv2_3702_8_78
Type: pfam
Location: 83798 - 84961 (+)
Gene ID: HRGMv2_3702_8_79
Type: TC
Location: 84977 - 86386 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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