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Cluster: HRGMv2_3702_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3702_7 HRGMv2_3702_7_57 61665 62882 - 3.A.1.122.2
TC HRGMv2_3702_7 HRGMv2_3702_7_58 62872 63576 - 3.A.1.122.2
pfam HRGMv2_3702_7 HRGMv2_3702_7_59 63591 64736 - HlyD_3 | Biotin_lipoyl_2 | HlyD_D23
TC HRGMv2_3702_7 HRGMv2_3702_7_60 64976 66139 + 2.A.39.1.3
pfam HRGMv2_3702_7 HRGMv2_3702_7_61 66344 66793 + Acetyltransf_1 | FR47 | Acetyltransf_7 | Acetyltransf_10
CAZyme HRGMv2_3702_7 HRGMv2_3702_7_62 66855 68933 - GT51
TC HRGMv2_3702_7 HRGMv2_3702_7_63 69258 71666 + 8.A.7.1.5
Gene ID: HRGMv2_3702_7_57
Type: TC
Location: 61665 - 62882 (-)
Gene ID: HRGMv2_3702_7_58
Type: TC
Location: 62872 - 63576 (-)
Gene ID: HRGMv2_3702_7_59
Type: pfam
Location: 63591 - 64736 (-)
Gene ID: HRGMv2_3702_7_60
Type: TC
Location: 64976 - 66139 (+)
Gene ID: HRGMv2_3702_7_61
Type: pfam
Location: 66344 - 66793 (+)
Gene ID: HRGMv2_3702_7_62
Type: CAZyme
Location: 66855 - 68933 (-)
Gene ID: HRGMv2_3702_7_63
Type: TC
Location: 69258 - 71666 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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