Cluster: HRGMv2_3701_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3701
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3701_14 | HRGMv2_3701_14_1 | 3 | 1208 | - | 1.B.23.1.18 |
| pfam | HRGMv2_3701_14 | HRGMv2_3701_14_2 | 1226 | 2005 | - | S6PP | Hydrolase_3 |
| CAZyme | HRGMv2_3701_14 | HRGMv2_3701_14_3 | 2017 | 3684 | - | GH13_31 |
| TC | HRGMv2_3701_14 | HRGMv2_3701_14_4 | 3694 | 5850 | - | 4.A.1.1.8 |
Gene ID: HRGMv2_3701_14_1
Type: TC
Location: 3 - 1208 (-)
Type: TC
Location: 3 - 1208 (-)
Gene ID: HRGMv2_3701_14_2
Type: pfam
Location: 1226 - 2005 (-)
Type: pfam
Location: 1226 - 2005 (-)
Gene ID: HRGMv2_3701_14_3
Type: CAZyme
Location: 2017 - 3684 (-)
Type: CAZyme
Location: 2017 - 3684 (-)
Gene ID: HRGMv2_3701_14_4
Type: TC
Location: 3694 - 5850 (-)
Type: TC
Location: 3694 - 5850 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.