Cluster: HRGMv2_3701_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3701
- CGC Family ID: CGCFAM_04439
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3701_7 | HRGMv2_3701_7_20 | 17802 | 18638 | + | 3.A.1.132.3 |
| pfam | HRGMv2_3701_7 | HRGMv2_3701_7_21 | 18996 | 20840 | - | Alk_phosphatase |
| sulfatase | HRGMv2_3701_7 | HRGMv2_3701_7_22 | 20958 | 21845 | + | S1_7 |
| CAZyme | HRGMv2_3701_7 | HRGMv2_3701_7_23 | 21842 | 22990 | - | GH3 |
| CAZyme | HRGMv2_3701_7 | HRGMv2_3701_7_24 | 22977 | 24131 | - | CE9 |
Gene ID: HRGMv2_3701_7_20
Type: TC
Location: 17802 - 18638 (+)
Type: TC
Location: 17802 - 18638 (+)
Gene ID: HRGMv2_3701_7_21
Type: pfam
Location: 18996 - 20840 (-)
Type: pfam
Location: 18996 - 20840 (-)
Gene ID: HRGMv2_3701_7_22
Type: sulfatase
Location: 20958 - 21845 (+)
Type: sulfatase
Location: 20958 - 21845 (+)
Gene ID: HRGMv2_3701_7_23
Type: CAZyme
Location: 21842 - 22990 (-)
Type: CAZyme
Location: 21842 - 22990 (-)
Gene ID: HRGMv2_3701_7_24
Type: CAZyme
Location: 22977 - 24131 (-)
Type: CAZyme
Location: 22977 - 24131 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.