Cluster: HRGMv2_3701_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3701
- CGC Family ID: CGCFAM_01068
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3701_4 | HRGMv2_3701_4_46 | 54671 | 56080 | - | AA4 |
| TC | HRGMv2_3701_4 | HRGMv2_3701_4_47 | 56342 | 58270 | - | 3.A.1.121.4 |
| TC | HRGMv2_3701_4 | HRGMv2_3701_4_48 | 58606 | 59919 | + | 2.A.35.1.4 |
Gene ID: HRGMv2_3701_4_46
Type: CAZyme
Location: 54671 - 56080 (-)
Type: CAZyme
Location: 54671 - 56080 (-)
Gene ID: HRGMv2_3701_4_47
Type: TC
Location: 56342 - 58270 (-)
Type: TC
Location: 56342 - 58270 (-)
Gene ID: HRGMv2_3701_4_48
Type: TC
Location: 58606 - 59919 (+)
Type: TC
Location: 58606 - 59919 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.