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Cluster: HRGMv2_3701_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3701_2 HRGMv2_3701_2_33 36874 37884 + 2.A.28.2.4
pfam HRGMv2_3701_2 HRGMv2_3701_2_34 37995 38672 + DUF554
pfam HRGMv2_3701_2 HRGMv2_3701_2_35 38684 39298 + UDG
TC HRGMv2_3701_2 HRGMv2_3701_2_36 39671 40678 + 2.A.28.2.4
STP HRGMv2_3701_2 HRGMv2_3701_2_37 40672 41331 - TetR_N
TC HRGMv2_3701_2 HRGMv2_3701_2_38 41346 42461 - 3.A.1.105.4
TC HRGMv2_3701_2 HRGMv2_3701_2_39 42461 43576 - 3.A.1.105.4
TC HRGMv2_3701_2 HRGMv2_3701_2_40 43573 45336 - 3.A.1.105.4
TC HRGMv2_3701_2 HRGMv2_3701_2_41 45357 46343 - 3.A.1.105.4
NULL(UNKNOWN) HRGMv2_3701_2 HRGMv2_3701_2_42 46507 47130 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3701_2 HRGMv2_3701_2_43 47078 47554 + 9.B.34.1.1
NULL(UNKNOWN) HRGMv2_3701_2 HRGMv2_3701_2_44 47725 48351 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3701_2 HRGMv2_3701_2_45 48374 49261 - Radical_SAM
TC HRGMv2_3701_2 HRGMv2_3701_2_46 49334 50233 - 2.A.7.3.31
STP HRGMv2_3701_2 HRGMv2_3701_2_47 50467 55029 - GATase_2
pfam HRGMv2_3701_2 HRGMv2_3701_2_48 55217 55897 - UDG
CAZyme HRGMv2_3701_2 HRGMv2_3701_2_49 55914 57524 - GT83
CAZyme HRGMv2_3701_2 HRGMv2_3701_2_50 57536 59095 - GT83
TC HRGMv2_3701_2 HRGMv2_3701_2_51 59092 59685 - 9.B.27.2.5
NULL(UNKNOWN) HRGMv2_3701_2 HRGMv2_3701_2_52 59775 60725 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3701_2 HRGMv2_3701_2_53 60856 61575 + 9.B.20.1.4
Gene ID: HRGMv2_3701_2_33
Type: TC
Location: 36874 - 37884 (+)
Gene ID: HRGMv2_3701_2_34
Type: pfam
Location: 37995 - 38672 (+)
Gene ID: HRGMv2_3701_2_35
Type: pfam
Location: 38684 - 39298 (+)
Gene ID: HRGMv2_3701_2_36
Type: TC
Location: 39671 - 40678 (+)
Gene ID: HRGMv2_3701_2_37
Type: STP
Location: 40672 - 41331 (-)
Gene ID: HRGMv2_3701_2_38
Type: TC
Location: 41346 - 42461 (-)
Gene ID: HRGMv2_3701_2_39
Type: TC
Location: 42461 - 43576 (-)
Gene ID: HRGMv2_3701_2_40
Type: TC
Location: 43573 - 45336 (-)
Gene ID: HRGMv2_3701_2_41
Type: TC
Location: 45357 - 46343 (-)
Gene ID: HRGMv2_3701_2_42
Type:
Location: 46507 - 47130 (+)
Gene ID: HRGMv2_3701_2_43
Type: TC
Location: 47078 - 47554 (+)
Gene ID: HRGMv2_3701_2_44
Type:
Location: 47725 - 48351 (-)
Gene ID: HRGMv2_3701_2_45
Type: pfam
Location: 48374 - 49261 (-)
Gene ID: HRGMv2_3701_2_46
Type: TC
Location: 49334 - 50233 (-)
Gene ID: HRGMv2_3701_2_47
Type: STP
Location: 50467 - 55029 (-)
Gene ID: HRGMv2_3701_2_48
Type: pfam
Location: 55217 - 55897 (-)
Gene ID: HRGMv2_3701_2_49
Type: CAZyme
Location: 55914 - 57524 (-)
Gene ID: HRGMv2_3701_2_50
Type: CAZyme
Location: 57536 - 59095 (-)
Gene ID: HRGMv2_3701_2_51
Type: TC
Location: 59092 - 59685 (-)
Gene ID: HRGMv2_3701_2_52
Type:
Location: 59775 - 60725 (-)
Gene ID: HRGMv2_3701_2_53
Type: TC
Location: 60856 - 61575 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_C
→
Class
Negativicutes
→
Order
Veillonellales
→
Family
Megasphaeraceae
→
Genus
Megasphaera
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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