Cluster: HRGMv2_3701_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3701
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3701_31 | HRGMv2_3701_31_20 | 15913 | 16905 | + | 8.A.5.1.6 |
| TC | HRGMv2_3701_31 | HRGMv2_3701_31_21 | 16902 | 17762 | - | 2.A.7.3.26 |
| pfam | HRGMv2_3701_31 | HRGMv2_3701_31_22 | 17919 | 18527 | + | CoaE |
| CAZyme | HRGMv2_3701_31 | HRGMv2_3701_31_23 | 18634 | 19113 | + | GH23 |
Gene ID: HRGMv2_3701_31_20
Type: TC
Location: 15913 - 16905 (+)
Type: TC
Location: 15913 - 16905 (+)
Gene ID: HRGMv2_3701_31_21
Type: TC
Location: 16902 - 17762 (-)
Type: TC
Location: 16902 - 17762 (-)
Gene ID: HRGMv2_3701_31_22
Type: pfam
Location: 17919 - 18527 (+)
Type: pfam
Location: 17919 - 18527 (+)
Gene ID: HRGMv2_3701_31_23
Type: CAZyme
Location: 18634 - 19113 (+)
Type: CAZyme
Location: 18634 - 19113 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.