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Cluster: HRGMv2_3701_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3701_23 HRGMv2_3701_23_19 12890 13606 - 2.A.40.7.6
TC HRGMv2_3701_23 HRGMv2_3701_23_20 13603 14283 - 2.A.40.7.2
peptidase HRGMv2_3701_23 HRGMv2_3701_23_21 14474 16216 + M38.UPW
NULL(UNKNOWN) HRGMv2_3701_23 HRGMv2_3701_23_22 16228 16470 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3701_23 HRGMv2_3701_23_23 16564 17337 + GH23
TC HRGMv2_3701_23 HRGMv2_3701_23_24 17427 18497 + 3.A.1.11.8
TC HRGMv2_3701_23 HRGMv2_3701_23_25 18490 19317 + 3.A.1.11.1
TC HRGMv2_3701_23 HRGMv2_3701_23_26 19314 20096 + 3.A.1.11.1
TC HRGMv2_3701_23 HRGMv2_3701_23_27 20111 21175 + 3.A.1.11.7
Gene ID: HRGMv2_3701_23_19
Type: TC
Location: 12890 - 13606 (-)
Gene ID: HRGMv2_3701_23_20
Type: TC
Location: 13603 - 14283 (-)
Gene ID: HRGMv2_3701_23_21
Type: peptidase
Location: 14474 - 16216 (+)
Gene ID: HRGMv2_3701_23_22
Type:
Location: 16228 - 16470 (+)
Gene ID: HRGMv2_3701_23_23
Type: CAZyme
Location: 16564 - 17337 (+)
Gene ID: HRGMv2_3701_23_24
Type: TC
Location: 17427 - 18497 (+)
Gene ID: HRGMv2_3701_23_25
Type: TC
Location: 18490 - 19317 (+)
Gene ID: HRGMv2_3701_23_26
Type: TC
Location: 19314 - 20096 (+)
Gene ID: HRGMv2_3701_23_27
Type: TC
Location: 20111 - 21175 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_C
→
Class
Negativicutes
→
Order
Veillonellales
→
Family
Megasphaeraceae
→
Genus
Megasphaera
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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