Cluster: HRGMv2_3700_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3700
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3700_19 | HRGMv2_3700_19_42 | 41696 | 42394 | - | 2.A.109.1.5 |
| pfam | HRGMv2_3700_19 | HRGMv2_3700_19_43 | 42548 | 43831 | - | Lar_N | LarA_C |
| CAZyme | HRGMv2_3700_19 | HRGMv2_3700_19_44 | 43975 | 45396 | - | AA4 |
| TC | HRGMv2_3700_19 | HRGMv2_3700_19_45 | 45874 | 47421 | - | 2.A.14.1.3 |
Gene ID: HRGMv2_3700_19_42
Type: TC
Location: 41696 - 42394 (-)
Type: TC
Location: 41696 - 42394 (-)
Gene ID: HRGMv2_3700_19_43
Type: pfam
Location: 42548 - 43831 (-)
Type: pfam
Location: 42548 - 43831 (-)
Gene ID: HRGMv2_3700_19_44
Type: CAZyme
Location: 43975 - 45396 (-)
Type: CAZyme
Location: 43975 - 45396 (-)
Gene ID: HRGMv2_3700_19_45
Type: TC
Location: 45874 - 47421 (-)
Type: TC
Location: 45874 - 47421 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.