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Cluster: HRGMv2_3700_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3700_17 HRGMv2_3700_17_1 100 924 - 3.A.1.24.1
TC HRGMv2_3700_17 HRGMv2_3700_17_2 1372 2514 + 2.A.1.60.3
CAZyme HRGMv2_3700_17 HRGMv2_3700_17_3 2813 4213 - AA4
NULL(UNKNOWN) HRGMv2_3700_17 HRGMv2_3700_17_4 4280 4708 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3700_17 HRGMv2_3700_17_5 4725 6071 - 2.A.1.3.70
pfam HRGMv2_3700_17 HRGMv2_3700_17_6 6107 7462 - AAA_14 | DUF4143
peptidase HRGMv2_3700_17 HRGMv2_3700_17_7 7964 9118 + M20.UPD
TC HRGMv2_3700_17 HRGMv2_3700_17_8 9115 10137 + 3.A.1.24.2
TC HRGMv2_3700_17 HRGMv2_3700_17_9 10137 10796 + 3.A.1.24.5
Gene ID: HRGMv2_3700_17_1
Type: TC
Location: 100 - 924 (-)
Gene ID: HRGMv2_3700_17_2
Type: TC
Location: 1372 - 2514 (+)
Gene ID: HRGMv2_3700_17_3
Type: CAZyme
Location: 2813 - 4213 (-)
Gene ID: HRGMv2_3700_17_4
Type:
Location: 4280 - 4708 (-)
Gene ID: HRGMv2_3700_17_5
Type: TC
Location: 4725 - 6071 (-)
Gene ID: HRGMv2_3700_17_6
Type: pfam
Location: 6107 - 7462 (-)
Gene ID: HRGMv2_3700_17_7
Type: peptidase
Location: 7964 - 9118 (+)
Gene ID: HRGMv2_3700_17_8
Type: TC
Location: 9115 - 10137 (+)
Gene ID: HRGMv2_3700_17_9
Type: TC
Location: 10137 - 10796 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_C
→
Class
Negativicutes
→
Order
Veillonellales
→
Family
Megasphaeraceae
→
Genus
Megasphaera
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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