Cluster: HRGMv2_3700_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3700
- CGC Family ID: CGCFAM_03128
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3700_16 | HRGMv2_3700_16_14 | 16749 | 17228 | - | GH23 |
| pfam | HRGMv2_3700_16 | HRGMv2_3700_16_15 | 17335 | 17943 | - | CoaE |
| TC | HRGMv2_3700_16 | HRGMv2_3700_16_16 | 18102 | 18962 | + | 2.A.7.3.26 |
| TC | HRGMv2_3700_16 | HRGMv2_3700_16_17 | 18959 | 19951 | - | 8.A.5.1.6 |
Gene ID: HRGMv2_3700_16_14
Type: CAZyme
Location: 16749 - 17228 (-)
Type: CAZyme
Location: 16749 - 17228 (-)
Gene ID: HRGMv2_3700_16_15
Type: pfam
Location: 17335 - 17943 (-)
Type: pfam
Location: 17335 - 17943 (-)
Gene ID: HRGMv2_3700_16_16
Type: TC
Location: 18102 - 18962 (+)
Type: TC
Location: 18102 - 18962 (+)
Gene ID: HRGMv2_3700_16_17
Type: TC
Location: 18959 - 19951 (-)
Type: TC
Location: 18959 - 19951 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.