Cluster: HRGMv2_3700_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3700
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3700_15 | HRGMv2_3700_15_19 | 16628 | 17593 | + | 9.B.146.1.6 |
| pfam | HRGMv2_3700_15 | HRGMv2_3700_15_20 | 17651 | 19018 | + | Mur_ligase_C | Mur_ligase_M |
| CAZyme | HRGMv2_3700_15 | HRGMv2_3700_15_21 | 19052 | 20173 | + | GT28 |
Gene ID: HRGMv2_3700_15_19
Type: TC
Location: 16628 - 17593 (+)
Type: TC
Location: 16628 - 17593 (+)
Gene ID: HRGMv2_3700_15_20
Type: pfam
Location: 17651 - 19018 (+)
Type: pfam
Location: 17651 - 19018 (+)
Gene ID: HRGMv2_3700_15_21
Type: CAZyme
Location: 19052 - 20173 (+)
Type: CAZyme
Location: 19052 - 20173 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.