Cluster: HRGMv2_3700_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3700
- CGC Family ID: CGCFAM_06775
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3700_54 | HRGMv2_3700_54_8 | 8100 | 9533 | - | 1.B.23.1.3 |
| pfam | HRGMv2_3700_54 | HRGMv2_3700_54_9 | 9551 | 10330 | - | S6PP | Hydrolase_3 |
| CAZyme | HRGMv2_3700_54 | HRGMv2_3700_54_10 | 10342 | 12009 | - | GH13_31 |
| TC | HRGMv2_3700_54 | HRGMv2_3700_54_11 | 12019 | 14181 | - | 4.A.1.1.8 |
Gene ID: HRGMv2_3700_54_8
Type: TC
Location: 8100 - 9533 (-)
Type: TC
Location: 8100 - 9533 (-)
Gene ID: HRGMv2_3700_54_9
Type: pfam
Location: 9551 - 10330 (-)
Type: pfam
Location: 9551 - 10330 (-)
Gene ID: HRGMv2_3700_54_10
Type: CAZyme
Location: 10342 - 12009 (-)
Type: CAZyme
Location: 10342 - 12009 (-)
Gene ID: HRGMv2_3700_54_11
Type: TC
Location: 12019 - 14181 (-)
Type: TC
Location: 12019 - 14181 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.