Cluster: HRGMv2_3700_CGC15
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3700
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3700_47 | HRGMv2_3700_47_4 | 4799 | 5863 | - | 3.A.1.11.7 |
| TC | HRGMv2_3700_47 | HRGMv2_3700_47_5 | 5879 | 6658 | - | 3.A.1.11.1 |
| TC | HRGMv2_3700_47 | HRGMv2_3700_47_6 | 6658 | 7485 | - | 3.A.1.11.1 |
| TC | HRGMv2_3700_47 | HRGMv2_3700_47_7 | 7478 | 8548 | - | 3.A.1.11.8 |
| CAZyme | HRGMv2_3700_47 | HRGMv2_3700_47_8 | 8639 | 9418 | - | GH23 |
| NULL(UNKNOWN) | HRGMv2_3700_47 | HRGMv2_3700_47_9 | 9525 | 9767 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | HRGMv2_3700_47 | HRGMv2_3700_47_10 | 9780 | 11519 | - | M38.UPW |
| TC | HRGMv2_3700_47 | HRGMv2_3700_47_11 | 11731 | 13125 | + | 2.A.40.7.6 |
Gene ID: HRGMv2_3700_47_4
Type: TC
Location: 4799 - 5863 (-)
Type: TC
Location: 4799 - 5863 (-)
Gene ID: HRGMv2_3700_47_5
Type: TC
Location: 5879 - 6658 (-)
Type: TC
Location: 5879 - 6658 (-)
Gene ID: HRGMv2_3700_47_6
Type: TC
Location: 6658 - 7485 (-)
Type: TC
Location: 6658 - 7485 (-)
Gene ID: HRGMv2_3700_47_7
Type: TC
Location: 7478 - 8548 (-)
Type: TC
Location: 7478 - 8548 (-)
Gene ID: HRGMv2_3700_47_8
Type: CAZyme
Location: 8639 - 9418 (-)
Type: CAZyme
Location: 8639 - 9418 (-)
Gene ID: HRGMv2_3700_47_9
Type:
Location: 9525 - 9767 (-)
Type:
Location: 9525 - 9767 (-)
Gene ID: HRGMv2_3700_47_10
Type: peptidase
Location: 9780 - 11519 (-)
Type: peptidase
Location: 9780 - 11519 (-)
Gene ID: HRGMv2_3700_47_11
Type: TC
Location: 11731 - 13125 (+)
Type: TC
Location: 11731 - 13125 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.