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Cluster: HRGMv2_3700_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3700_32 HRGMv2_3700_32_3 2284 3288 + 3.A.1.23.1
pfam HRGMv2_3700_32 HRGMv2_3700_32_4 3301 4110 + CbiQ
TC HRGMv2_3700_32 HRGMv2_3700_32_5 4107 4754 + 3.A.1.23.7
NULL(UNKNOWN) HRGMv2_3700_32 HRGMv2_3700_32_6 5174 5356 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3700_32 HRGMv2_3700_32_7 5344 6561 - GH73
pfam HRGMv2_3700_32 HRGMv2_3700_32_8 6551 6952 - CGGC
pfam HRGMv2_3700_32 HRGMv2_3700_32_9 6966 7643 - CpXC
TC HRGMv2_3700_32 HRGMv2_3700_32_10 7818 8138 - 2.A.7.1.4
TC HRGMv2_3700_32 HRGMv2_3700_32_11 8395 9261 + 2.A.7.3.48
Gene ID: HRGMv2_3700_32_3
Type: TC
Location: 2284 - 3288 (+)
Gene ID: HRGMv2_3700_32_4
Type: pfam
Location: 3301 - 4110 (+)
Gene ID: HRGMv2_3700_32_5
Type: TC
Location: 4107 - 4754 (+)
Gene ID: HRGMv2_3700_32_6
Type:
Location: 5174 - 5356 (+)
Gene ID: HRGMv2_3700_32_7
Type: CAZyme
Location: 5344 - 6561 (-)
Gene ID: HRGMv2_3700_32_8
Type: pfam
Location: 6551 - 6952 (-)
Gene ID: HRGMv2_3700_32_9
Type: pfam
Location: 6966 - 7643 (-)
Gene ID: HRGMv2_3700_32_10
Type: TC
Location: 7818 - 8138 (-)
Gene ID: HRGMv2_3700_32_11
Type: TC
Location: 8395 - 9261 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_C
→
Class
Negativicutes
→
Order
Veillonellales
→
Family
Megasphaeraceae
→
Genus
Megasphaera
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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