Cluster: HRGMv2_3700_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3700
- CGC Family ID: CGCFAM_00313
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3700_4 | HRGMv2_3700_4_48 | 58504 | 59223 | - | 9.B.20.1.4 |
| NULL(UNKNOWN) | HRGMv2_3700_4 | HRGMv2_3700_4_49 | 59352 | 60302 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3700_4 | HRGMv2_3700_4_50 | 60393 | 60986 | + | 9.B.27.2.5 |
| CAZyme | HRGMv2_3700_4 | HRGMv2_3700_4_51 | 60983 | 62542 | + | GT83 |
| CAZyme | HRGMv2_3700_4 | HRGMv2_3700_4_52 | 62554 | 64164 | + | GT83 |
Gene ID: HRGMv2_3700_4_48
Type: TC
Location: 58504 - 59223 (-)
Type: TC
Location: 58504 - 59223 (-)
Gene ID: HRGMv2_3700_4_49
Type:
Location: 59352 - 60302 (+)
Type:
Location: 59352 - 60302 (+)
Gene ID: HRGMv2_3700_4_50
Type: TC
Location: 60393 - 60986 (+)
Type: TC
Location: 60393 - 60986 (+)
Gene ID: HRGMv2_3700_4_51
Type: CAZyme
Location: 60983 - 62542 (+)
Type: CAZyme
Location: 60983 - 62542 (+)
Gene ID: HRGMv2_3700_4_52
Type: CAZyme
Location: 62554 - 64164 (+)
Type: CAZyme
Location: 62554 - 64164 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.